I think I discovered the problem. After I rebooted my computer, the way daylight savings time is calculated is slightly different. So, any file created before 2012 is one hour off. So, it was trying to back up a lot of files unnecessarily. I changed the back-up script so anything file changed within 1 hour but have exactly the same size will not be backed up. Since I only back up these drives everywhere other week at 2am, I don't think should ever be a problem. (If you decide to start working on stuff at 1am, 2am, or 3am, this could be a problem. I have no intention of doing this.)